Enterobacter cloacae complex DNA-seq of Homo Sapiens: blood - SRA

SRX12355669: Enterobacter cloacae complex DNA-seq of Homo Sapiens: blood
1 OXFORD_NANOPORE (PromethION) run: 138,723 spots, 2.7G bases, 2.3Gb downloads

Design: 1.High quality genomic DNA was extracted and tested for purity, concentration and integrity by Nanodrop, Qubit and 0.35% agarose gel electrophoresis; 2. Recovery of large fragments of DNA;3. Library construction :(1)DNA damage repair and terminal repair, magnetic bead purification;(2) joint connection, magnetic beads purification;(3)Qubit library quantification;4. Sequencing on the machine.

Submitted by: Yongchuan Hospital of Chongqing Medical University

Study: Bacteria Genome sequencing and assembly

PRJNA757181 • SRP338659 • All experiments • All runs

show Abstracthide Abstract

Carbapenem-resistant Enterobacteriaceae (CRE) has been considered a serious global threat, the objectives of our study were the following: (i) to describe the prevalence of clinical CRE isolates, (ii) to identify the mechanisms and clonal relatedness among these CRE strains, (iii) to examine the genetic context of IMP-4.

Sample: Microbe sample from Enterobacter cloacae complex

SAMN20825299 • SRS10327795 • All experiments • All runs

Organism: Enterobacter cloacae complex sp.

Library:

Name: ECL60-nanopore

Instrument: PromethION

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 138,723 spots, 2.7G bases, 2.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR16069091	138,723	2.7G	2.3Gb	2021-09-25

ID:: 16308164

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity